Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfx6Q8C7R7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx6Q8C7R7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx6Q8C7R7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.44■□□□□ 0.54
Rfx6Q8C7R7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx6Q8C7R7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfx6Q8C7R7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.44■□□□□ 0.54
Rfx6Q8C7R7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rfx6Q8C7R7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Rfx6Q8C7R7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Rfx6Q8C7R7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx6Q8C7R7 Reep4-203ENSMUST00000226563 1444 ntBASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx6Q8C7R7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx6Q8C7R7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rfx6Q8C7R7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Gm13146-201ENSMUST00000118508 780 ntBASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx6Q8C7R7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms