Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Spcs1-204ENSMUST00000226782 949 ntBASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Gm6139-201ENSMUST00000079261 882 ntBASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Gm15039-201ENSMUST00000118914 875 ntBASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Gm8493-201ENSMUST00000196881 489 ntBASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tsen54Q8C2A2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Gm8969-201ENSMUST00000199694 526 ntBASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tsen54Q8C2A2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tsen54Q8C2A2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tsen54Q8C2A2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms