Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne3Q8BT60 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne3Q8BT60 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne3Q8BT60 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cpne3Q8BT60 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cpne3Q8BT60 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.52■□□□□ 0.4
Cpne3Q8BT60 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.52■□□□□ 0.4
Cpne3Q8BT60 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne3Q8BT60 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne3Q8BT60 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne3Q8BT60 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne3Q8BT60 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpne3Q8BT60 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne3Q8BT60 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne3Q8BT60 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Gm13534-201ENSMUST00000121169 513 ntBASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cpne3Q8BT60 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.48■□□□□ 0.39
Cpne3Q8BT60 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.48■□□□□ 0.39
Cpne3Q8BT60 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.48■□□□□ 0.39
Cpne3Q8BT60 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpne3Q8BT60 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpne3Q8BT60 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.46■□□□□ 0.39
Cpne3Q8BT60 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne3Q8BT60 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne3Q8BT60 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.46■□□□□ 0.39
Cpne3Q8BT60 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne3Q8BT60 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpne3Q8BT60 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms