Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Prpf18Q8BM39 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Gm6139-201ENSMUST00000079261 882 ntBASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf18Q8BM39 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf18Q8BM39 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf18Q8BM39 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Gm43173-201ENSMUST00000202246 593 ntBASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf18Q8BM39 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Gm27801-201ENSMUST00000184174 223 ntBASIC17.18■□□□□ 0.34
Prpf18Q8BM39 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf18Q8BM39 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms