Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Gm12527-201ENSMUST00000117967 564 ntBASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pum3Q8BKS9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Dio3-201ENSMUST00000097228 1449 ntBASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pum3Q8BKS9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pum3Q8BKS9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pum3Q8BKS9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pum3Q8BKS9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Zfp783-201ENSMUST00000095946 670 ntBASIC19.15■□□□□ 0.66
Pum3Q8BKS9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pum3Q8BKS9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Gm27275-201ENSMUST00000184318 272 ntBASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pum3Q8BKS9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms