Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.33■□□□□ 0.68
Smarcal1Q8BJL0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Smarcal1Q8BJL0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcal1Q8BJL0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Gm11539-201ENSMUST00000119837 557 ntBASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Gm13436-201ENSMUST00000120418 567 ntBASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Smarcal1Q8BJL0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcal1Q8BJL0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.29■□□□□ 0.68
Smarcal1Q8BJL0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.29■□□□□ 0.68
Smarcal1Q8BJL0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcal1Q8BJL0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcal1Q8BJL0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcal1Q8BJL0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcal1Q8BJL0 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.27■□□□□ 0.68
Smarcal1Q8BJL0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcal1Q8BJL0 Mir2861-201ENSMUST00000175539 82 ntBASIC19.27■□□□□ 0.68
Smarcal1Q8BJL0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcal1Q8BJL0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcal1Q8BJL0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcal1Q8BJL0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcal1Q8BJL0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarcal1Q8BJL0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smarcal1Q8BJL0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms