Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh20Q8BIZ0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh20Q8BIZ0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh20Q8BIZ0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh20Q8BIZ0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh20Q8BIZ0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.67■□□□□ 0.42
Pcdh20Q8BIZ0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Gm13534-201ENSMUST00000121169 513 ntBASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh20Q8BIZ0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Gm29257-201ENSMUST00000186115 639 ntBASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh20Q8BIZ0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh20Q8BIZ0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh20Q8BIZ0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Pcdh20Q8BIZ0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh20Q8BIZ0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh20Q8BIZ0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh20Q8BIZ0 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms