Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf38Q8BI21 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.46■□□□□ 0.39
Rnf38Q8BI21 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf38Q8BI21 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf38Q8BI21 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Gm10493-201ENSMUST00000097270 612 ntBASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf38Q8BI21 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf38Q8BI21 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf38Q8BI21 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms