Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn3bQ8BHK2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Scn3bQ8BHK2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn3bQ8BHK2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn3bQ8BHK2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn3bQ8BHK2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn3bQ8BHK2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Scn3bQ8BHK2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn3bQ8BHK2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms