Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim6Q8BGE7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim6Q8BGE7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim6Q8BGE7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim6Q8BGE7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim6Q8BGE7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim6Q8BGE7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Gm12821-201ENSMUST00000120022 600 ntBASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim6Q8BGE7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim6Q8BGE7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim6Q8BGE7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Gm26833-201ENSMUST00000180899 440 ntBASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim6Q8BGE7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Trim6Q8BGE7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim6Q8BGE7 Gm40848-201ENSMUST00000221998 324 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms