Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.85■□□□□ 0.45
Ubp1Q811S7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.84■□□□□ 0.45
Ubp1Q811S7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Gm22325-201ENSMUST00000158904 308 ntBASIC17.84■□□□□ 0.45
Ubp1Q811S7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ubp1Q811S7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubp1Q811S7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubp1Q811S7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.83■□□□□ 0.45
Ubp1Q811S7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubp1Q811S7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ubp1Q811S7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.83■□□□□ 0.44
Ubp1Q811S7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.83■□□□□ 0.44
Ubp1Q811S7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ubp1Q811S7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Gm44549-201ENSMUST00000208351 577 ntBASIC17.82■□□□□ 0.44
Ubp1Q811S7 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.82■□□□□ 0.44
Ubp1Q811S7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ubp1Q811S7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ubp1Q811S7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubp1Q811S7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.81■□□□□ 0.44
Ubp1Q811S7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.81■□□□□ 0.44
Ubp1Q811S7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ubp1Q811S7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ubp1Q811S7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.8■□□□□ 0.44
Ubp1Q811S7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.8■□□□□ 0.44
Ubp1Q811S7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ubp1Q811S7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ubp1Q811S7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms