Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx42Q810A7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx42Q810A7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx42Q810A7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx42Q810A7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ddx42Q810A7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx42Q810A7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx42Q810A7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.36■□□□□ 0.53
Ddx42Q810A7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx42Q810A7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.35■□□□□ 0.53
Ddx42Q810A7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx42Q810A7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ddx42Q810A7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx42Q810A7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx42Q810A7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx42Q810A7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx42Q810A7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.33■□□□□ 0.52
Ddx42Q810A7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.33■□□□□ 0.52
Ddx42Q810A7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.33■□□□□ 0.52
Ddx42Q810A7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx42Q810A7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx42Q810A7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx42Q810A7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx42Q810A7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.31■□□□□ 0.52
Ddx42Q810A7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx42Q810A7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms