Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ubfd1Q78JW9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ubfd1Q78JW9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Gm715-201ENSMUST00000117865 831 ntBASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubfd1Q78JW9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubfd1Q78JW9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubfd1Q78JW9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ubfd1Q78JW9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms