Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.74■□□□□ 0.75
ShbQ6PD21 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ShbQ6PD21 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Gm43514-201ENSMUST00000198852 424 ntBASIC19.74■□□□□ 0.75
ShbQ6PD21 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.74■□□□□ 0.75
ShbQ6PD21 Gm18115-201ENSMUST00000221209 621 ntBASIC19.74■□□□□ 0.75
ShbQ6PD21 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ShbQ6PD21 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ShbQ6PD21 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
ShbQ6PD21 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShbQ6PD21 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ShbQ6PD21 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShbQ6PD21 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.73■□□□□ 0.75
ShbQ6PD21 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ShbQ6PD21 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ShbQ6PD21 Mzt1-203ENSMUST00000227948 952 ntBASIC19.73■□□□□ 0.75
ShbQ6PD21 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShbQ6PD21 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ShbQ6PD21 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShbQ6PD21 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ShbQ6PD21 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.73■□□□□ 0.75
ShbQ6PD21 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ShbQ6PD21 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ShbQ6PD21 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ShbQ6PD21 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 Gm27357-201ENSMUST00000183754 135 ntBASIC19.72■□□□□ 0.75
ShbQ6PD21 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.72■□□□□ 0.75
ShbQ6PD21 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ShbQ6PD21 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ShbQ6PD21 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShbQ6PD21 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShbQ6PD21 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShbQ6PD21 Mir3081-201ENSMUST00000175305 84 ntBASIC19.71■□□□□ 0.75
ShbQ6PD21 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ShbQ6PD21 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.71■□□□□ 0.75
ShbQ6PD21 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShbQ6PD21 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShbQ6PD21 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ShbQ6PD21 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ShbQ6PD21 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShbQ6PD21 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ShbQ6PD21 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ShbQ6PD21 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
ShbQ6PD21 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ShbQ6PD21 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ShbQ6PD21 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShbQ6PD21 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ShbQ6PD21 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ShbQ6PD21 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShbQ6PD21 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShbQ6PD21 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.7■□□□□ 0.74
ShbQ6PD21 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ShbQ6PD21 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ShbQ6PD21 Gm24589-201ENSMUST00000116692 94 ntBASIC19.7■□□□□ 0.74
ShbQ6PD21 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ShbQ6PD21 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShbQ6PD21 Gm6443-201ENSMUST00000203599 874 ntBASIC19.7■□□□□ 0.74
ShbQ6PD21 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.7■□□□□ 0.74
ShbQ6PD21 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.7■□□□□ 0.74
ShbQ6PD21 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
ShbQ6PD21 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ShbQ6PD21 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ShbQ6PD21 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShbQ6PD21 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ShbQ6PD21 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ShbQ6PD21 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ShbQ6PD21 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ShbQ6PD21 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ShbQ6PD21 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShbQ6PD21 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ShbQ6PD21 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ShbQ6PD21 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShbQ6PD21 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ShbQ6PD21 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShbQ6PD21 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ShbQ6PD21 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ShbQ6PD21 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ShbQ6PD21 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ShbQ6PD21 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ShbQ6PD21 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ShbQ6PD21 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.67■□□□□ 0.74
ShbQ6PD21 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
ShbQ6PD21 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.67■□□□□ 0.74
ShbQ6PD21 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms