Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcd3Q6P9Z1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.63■□□□□ 0.25
Smarcd3Q6P9Z1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcd3Q6P9Z1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcd3Q6P9Z1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcd3Q6P9Z1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Gm9988-201ENSMUST00000069786 435 ntBASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.59■□□□□ 0.25
Smarcd3Q6P9Z1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smarcd3Q6P9Z1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms