Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Gm26571-201ENSMUST00000181399 666 ntBASIC20.27■□□□□ 0.84
Abcf1Q6P542 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Gm10033-202ENSMUST00000211874 928 ntBASIC20.27■□□□□ 0.84
Abcf1Q6P542 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Abcf1Q6P542 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Abcf1Q6P542 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Abcf1Q6P542 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Abcf1Q6P542 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Abcf1Q6P542 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.26■□□□□ 0.83
Abcf1Q6P542 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.26■□□□□ 0.83
Abcf1Q6P542 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.26■□□□□ 0.83
Abcf1Q6P542 AV356131-201ENSMUST00000206201 750 ntBASIC20.26■□□□□ 0.83
Abcf1Q6P542 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Abcf1Q6P542 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.25■□□□□ 0.83
Abcf1Q6P542 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Abcf1Q6P542 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.24■□□□□ 0.83
Abcf1Q6P542 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Abcf1Q6P542 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.23■□□□□ 0.83
Abcf1Q6P542 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Abcf1Q6P542 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abcf1Q6P542 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.23■□□□□ 0.83
Abcf1Q6P542 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.23■□□□□ 0.83
Abcf1Q6P542 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abcf1Q6P542 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abcf1Q6P542 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.23■□□□□ 0.83
Abcf1Q6P542 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abcf1Q6P542 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Abcf1Q6P542 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Abcf1Q6P542 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Gm27405-201ENSMUST00000184201 112 ntBASIC20.22■□□□□ 0.83
Abcf1Q6P542 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.22■□□□□ 0.83
Abcf1Q6P542 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Abcf1Q6P542 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.21■□□□□ 0.83
Abcf1Q6P542 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Gm7291-201ENSMUST00000199147 382 ntBASIC20.21■□□□□ 0.83
Abcf1Q6P542 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abcf1Q6P542 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms