Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Pcdhga7Q6DD96 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Gm10493-201ENSMUST00000097270 612 ntBASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga7Q6DD96 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhga7Q6DD96 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Gm42778-201ENSMUST00000199644 553 ntBASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhga7Q6DD96 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga7Q6DD96 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga7Q6DD96 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga7Q6DD96 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga7Q6DD96 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga7Q6DD96 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga7Q6DD96 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga7Q6DD96 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga7Q6DD96 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms