Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
VcanQ62059 Gm27357-201ENSMUST00000183754 135 ntBASIC17.11■□□□□ 0.33
VcanQ62059 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Birc2-201ENSMUST00000054878 378 ntBASIC17.11■□□□□ 0.33
VcanQ62059 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
VcanQ62059 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VcanQ62059 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.11■□□□□ 0.33
VcanQ62059 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.11■□□□□ 0.33
VcanQ62059 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.1■□□□□ 0.33
VcanQ62059 Mir8098-201ENSMUST00000184011 137 ntBASIC17.1■□□□□ 0.33
VcanQ62059 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Gm7791-201ENSMUST00000219066 539 ntBASIC17.1■□□□□ 0.33
VcanQ62059 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.1■□□□□ 0.33
VcanQ62059 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VcanQ62059 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.1■□□□□ 0.33
VcanQ62059 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Mir3081-201ENSMUST00000175305 84 ntBASIC17.1■□□□□ 0.33
VcanQ62059 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VcanQ62059 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VcanQ62059 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.09■□□□□ 0.33
VcanQ62059 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.09■□□□□ 0.33
VcanQ62059 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
VcanQ62059 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.09■□□□□ 0.33
VcanQ62059 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VcanQ62059 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
VcanQ62059 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VcanQ62059 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VcanQ62059 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
VcanQ62059 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VcanQ62059 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VcanQ62059 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VcanQ62059 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VcanQ62059 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VcanQ62059 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VcanQ62059 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.08■□□□□ 0.33
VcanQ62059 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.08■□□□□ 0.33
VcanQ62059 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.08■□□□□ 0.32
VcanQ62059 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.08■□□□□ 0.32
VcanQ62059 Gm21559-201ENSMUST00000220638 855 ntBASIC17.08■□□□□ 0.32
VcanQ62059 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VcanQ62059 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
VcanQ62059 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.07■□□□□ 0.32
VcanQ62059 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
VcanQ62059 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.07■□□□□ 0.32
VcanQ62059 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
VcanQ62059 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.07■□□□□ 0.32
VcanQ62059 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VcanQ62059 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
VcanQ62059 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VcanQ62059 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VcanQ62059 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VcanQ62059 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VcanQ62059 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VcanQ62059 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.06■□□□□ 0.32
VcanQ62059 Gm9013-201ENSMUST00000132939 882 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms