Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ctr9Q62018 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ctr9Q62018 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ctr9Q62018 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.36■■□□□ 1.01
Ctr9Q62018 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ctr9Q62018 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ctr9Q62018 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ctr9Q62018 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.35■■□□□ 1.01
Ctr9Q62018 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.35■■□□□ 1.01
Ctr9Q62018 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ctr9Q62018 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ctr9Q62018 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ctr9Q62018 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ctr9Q62018 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ctr9Q62018 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ctr9Q62018 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ctr9Q62018 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.34■■□□□ 1.01
Ctr9Q62018 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ctr9Q62018 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.34■■□□□ 1.01
Ctr9Q62018 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ctr9Q62018 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ctr9Q62018 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ctr9Q62018 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ctr9Q62018 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ctr9Q62018 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ctr9Q62018 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ctr9Q62018 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ctr9Q62018 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.33■■□□□ 1.01
Ctr9Q62018 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.33■■□□□ 1.01
Ctr9Q62018 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ctr9Q62018 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Ctr9Q62018 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Ctr9Q62018 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ctr9Q62018 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ctr9Q62018 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.32■■□□□ 1
Ctr9Q62018 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.32■■□□□ 1
Ctr9Q62018 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ctr9Q62018 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ctr9Q62018 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ctr9Q62018 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ctr9Q62018 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.32■■□□□ 1
Ctr9Q62018 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ctr9Q62018 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ctr9Q62018 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ctr9Q62018 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.32■■□□□ 1
Ctr9Q62018 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ctr9Q62018 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Ctr9Q62018 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.31■■□□□ 1
Ctr9Q62018 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ctr9Q62018 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ctr9Q62018 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ctr9Q62018 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Ctr9Q62018 Gm10252-201ENSMUST00000209541 832 ntBASIC21.31■■□□□ 1
Ctr9Q62018 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ctr9Q62018 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.31■■□□□ 1
Ctr9Q62018 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ctr9Q62018 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ctr9Q62018 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ctr9Q62018 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ctr9Q62018 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ctr9Q62018 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ctr9Q62018 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.3■■□□□ 1
Ctr9Q62018 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.3■■□□□ 1
Ctr9Q62018 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ctr9Q62018 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.3■■□□□ 1
Ctr9Q62018 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.3■■□□□ 1
Ctr9Q62018 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ctr9Q62018 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ctr9Q62018 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ctr9Q62018 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Ctr9Q62018 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.3■■□□□ 1
Ctr9Q62018 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ctr9Q62018 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.29■■□□□ 1
Ctr9Q62018 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ctr9Q62018 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.29■■□□□ 1
Ctr9Q62018 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ctr9Q62018 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ctr9Q62018 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ctr9Q62018 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.28■■□□□ 1
Ctr9Q62018 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ctr9Q62018 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.28■■□□□ 1
Ctr9Q62018 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ctr9Q62018 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ctr9Q62018 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ctr9Q62018 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ctr9Q62018 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Ctr9Q62018 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ctr9Q62018 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ctr9Q62018 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ctr9Q62018 Gm15378-201ENSMUST00000121894 207 ntBASIC21.27■■□□□ 1
Ctr9Q62018 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.27■■□□□ 1
Ctr9Q62018 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms