Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav7d-4Q5R1H9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav7d-4Q5R1H9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav7d-4Q5R1H9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-4Q5R1H9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-4Q5R1H9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-4Q5R1H9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-4Q5R1H9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-4Q5R1H9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-4Q5R1H9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-4Q5R1H9 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-4Q5R1H9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-4Q5R1H9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms