Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.1□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm27801-201ENSMUST00000184174 223 ntBASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gm11421-201ENSMUST00000122124 294 ntBASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav15-1-dv6-1Q5R1D2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms