Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clhc1Q5M6W3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clhc1Q5M6W3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clhc1Q5M6W3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clhc1Q5M6W3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clhc1Q5M6W3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Clhc1Q5M6W3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clhc1Q5M6W3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms