Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn2bQ56A07 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn2bQ56A07 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Scn2bQ56A07 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.96■□□□□ 0.47
Scn2bQ56A07 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn2bQ56A07 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Scn2bQ56A07 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.96■□□□□ 0.46
Scn2bQ56A07 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.95■□□□□ 0.46
Scn2bQ56A07 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn2bQ56A07 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2bQ56A07 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2bQ56A07 Gm13534-201ENSMUST00000121169 513 ntBASIC17.94■□□□□ 0.46
Scn2bQ56A07 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scn2bQ56A07 AV356131-201ENSMUST00000206201 750 ntBASIC17.94■□□□□ 0.46
Scn2bQ56A07 Gm10033-202ENSMUST00000211874 928 ntBASIC17.94■□□□□ 0.46
Scn2bQ56A07 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.94■□□□□ 0.46
Scn2bQ56A07 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scn2bQ56A07 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.94■□□□□ 0.46
Scn2bQ56A07 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2bQ56A07 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2bQ56A07 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Scn2bQ56A07 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn2bQ56A07 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn2bQ56A07 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.92■□□□□ 0.46
Scn2bQ56A07 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Gm26571-201ENSMUST00000181399 666 ntBASIC17.92■□□□□ 0.46
Scn2bQ56A07 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn2bQ56A07 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.92■□□□□ 0.46
Scn2bQ56A07 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn2bQ56A07 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn2bQ56A07 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Scn2bQ56A07 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Scn2bQ56A07 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms