Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm43183-201ENSMUST00000200632 547 ntBASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Gm18025-201ENSMUST00000221733 862 ntBASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rc3h1Q4VGL6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.97■□□□□ 0.95
Rc3h1Q4VGL6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h1Q4VGL6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h1Q4VGL6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Gm37292-201ENSMUST00000192062 758 ntBASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h1Q4VGL6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.93■□□□□ 0.94
Rc3h1Q4VGL6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rc3h1Q4VGL6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms