Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC31.9■■■□□ 2.7
Pds5bQ4VA53 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Pds5bQ4VA53 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pds5bQ4VA53 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Pds5bQ4VA53 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pds5bQ4VA53 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pds5bQ4VA53 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Pds5bQ4VA53 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC31.88■■■□□ 2.69
Pds5bQ4VA53 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
Pds5bQ4VA53 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pds5bQ4VA53 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pds5bQ4VA53 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pds5bQ4VA53 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pds5bQ4VA53 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pds5bQ4VA53 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pds5bQ4VA53 Gm24841-201ENSMUST00000158676 357 ntBASIC31.86■■■□□ 2.69
Pds5bQ4VA53 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Pds5bQ4VA53 AC132104.2-201ENSMUST00000215011 266 ntBASIC31.86■■■□□ 2.69
Pds5bQ4VA53 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pds5bQ4VA53 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Pds5bQ4VA53 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC31.85■■■□□ 2.69
Pds5bQ4VA53 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pds5bQ4VA53 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pds5bQ4VA53 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pds5bQ4VA53 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pds5bQ4VA53 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Pds5bQ4VA53 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Pds5bQ4VA53 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Pds5bQ4VA53 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pds5bQ4VA53 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC31.84■■■□□ 2.69
Pds5bQ4VA53 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pds5bQ4VA53 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
Pds5bQ4VA53 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pds5bQ4VA53 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Gm5864-201ENSMUST00000202263 970 ntBASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Gm27525-201ENSMUST00000184465 107 ntBASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pds5bQ4VA53 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Pds5bQ4VA53 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Pds5bQ4VA53 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Pds5bQ4VA53 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Pds5bQ4VA53 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Pds5bQ4VA53 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pds5bQ4VA53 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pds5bQ4VA53 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Pds5bQ4VA53 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC31.81■■■□□ 2.68
Pds5bQ4VA53 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Pds5bQ4VA53 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pds5bQ4VA53 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
Pds5bQ4VA53 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Pds5bQ4VA53 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pds5bQ4VA53 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pds5bQ4VA53 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pds5bQ4VA53 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Pds5bQ4VA53 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC31.79■■■□□ 2.68
Pds5bQ4VA53 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC31.79■■■□□ 2.68
Pds5bQ4VA53 Il3ra-202ENSMUST00000223589 738 ntBASIC31.79■■■□□ 2.68
Pds5bQ4VA53 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pds5bQ4VA53 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pds5bQ4VA53 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Pds5bQ4VA53 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Pds5bQ4VA53 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC31.78■■■□□ 2.68
Pds5bQ4VA53 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC31.78■■■□□ 2.68
Pds5bQ4VA53 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Pds5bQ4VA53 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
Pds5bQ4VA53 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Pds5bQ4VA53 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Pds5bQ4VA53 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
Pds5bQ4VA53 AC108858.1-201ENSMUST00000228461 1498 ntBASIC31.76■■■□□ 2.68
Pds5bQ4VA53 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Pds5bQ4VA53 Olfr129-201ENSMUST00000122318 993 ntBASIC31.76■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms