Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm29609Q3UU56 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm29609Q3UU56 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm29609Q3UU56 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Gm29609Q3UU56 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm29609Q3UU56 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Gm43799-201ENSMUST00000201845 579 ntBASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm29609Q3UU56 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Gm29609Q3UU56 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Gm29609Q3UU56 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm29609Q3UU56 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Gm13146-201ENSMUST00000118508 780 ntBASIC19.01■□□□□ 0.63
Gm29609Q3UU56 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Gm10231-201ENSMUST00000181584 441 ntBASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Gm10175-202ENSMUST00000208752 441 ntBASIC19.01■□□□□ 0.63
Gm29609Q3UU56 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Rarb-207ENSMUST00000225921 2756 ntBASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.01■□□□□ 0.63
Gm29609Q3UU56 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gm29609Q3UU56 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 CT010467.1-202ENSMUST00000205406 714 ntBASIC19■□□□□ 0.63
Gm29609Q3UU56 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19■□□□□ 0.63
Gm29609Q3UU56 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19■□□□□ 0.63
Gm29609Q3UU56 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm29609Q3UU56 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm29609Q3UU56 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm29609Q3UU56 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gm29609Q3UU56 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm29609Q3UU56 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm29609Q3UU56 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm29609Q3UU56 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.98■□□□□ 0.63
Gm29609Q3UU56 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm29609Q3UU56 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.98■□□□□ 0.63
Gm29609Q3UU56 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm29609Q3UU56 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.98■□□□□ 0.63
Gm29609Q3UU56 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Grk6-206ENSMUST00000224995 2971 ntBASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm29609Q3UU56 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms