Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zfp560Q3URI6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zfp560Q3URI6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Zfp560Q3URI6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Zfp560Q3URI6 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.14■□□□□ 0.5
Zfp560Q3URI6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Gm2399-201ENSMUST00000104944 225 ntBASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Gm12441-201ENSMUST00000121806 588 ntBASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Zfp560Q3URI6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Zfp560Q3URI6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Zfp560Q3URI6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp560Q3URI6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp560Q3URI6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp560Q3URI6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp560Q3URI6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp560Q3URI6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Zfp560Q3URI6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.12■□□□□ 0.49
Zfp560Q3URI6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms