Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks1brtQ3UNC9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks1brtQ3UNC9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cks1brtQ3UNC9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cks1brtQ3UNC9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Gm7143-201ENSMUST00000222811 859 ntBASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks1brtQ3UNC9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms