Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.39■□□□□ 0.69
Upf3bQ3ULL6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf3bQ3ULL6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf3bQ3ULL6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf3bQ3ULL6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf3bQ3ULL6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf3bQ3ULL6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf3bQ3ULL6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf3bQ3ULL6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Gm2399-201ENSMUST00000104944 225 ntBASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf3bQ3ULL6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.35■□□□□ 0.69
Upf3bQ3ULL6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Upf3bQ3ULL6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upf3bQ3ULL6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upf3bQ3ULL6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.33■□□□□ 0.69
Upf3bQ3ULL6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upf3bQ3ULL6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.33■□□□□ 0.69
Upf3bQ3ULL6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Upf3bQ3ULL6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.33■□□□□ 0.68
Upf3bQ3ULL6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf3bQ3ULL6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Upf3bQ3ULL6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upf3bQ3ULL6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Upf3bQ3ULL6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.33■□□□□ 0.68
Upf3bQ3ULL6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.33■□□□□ 0.68
Upf3bQ3ULL6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upf3bQ3ULL6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms