Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc28Q3TX51 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc28Q3TX51 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc28Q3TX51 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Mir1199-201ENSMUST00000117015 119 ntBASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc28Q3TX51 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lrrc28Q3TX51 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Gm715-201ENSMUST00000117865 831 ntBASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Gm10138-203ENSMUST00000206952 366 ntBASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc28Q3TX51 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc28Q3TX51 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc28Q3TX51 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms