Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.56■□□□□ 0.08
Smn1P97801 Gm38205-201ENSMUST00000192243 258 ntBASIC15.56■□□□□ 0.08
Smn1P97801 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.56■□□□□ 0.08
Smn1P97801 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.56■□□□□ 0.08
Smn1P97801 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.56■□□□□ 0.08
Smn1P97801 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smn1P97801 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smn1P97801 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smn1P97801 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smn1P97801 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Smn1P97801 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.55■□□□□ 0.08
Smn1P97801 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smn1P97801 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smn1P97801 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smn1P97801 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Smn1P97801 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smn1P97801 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.55■□□□□ 0.08
Smn1P97801 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smn1P97801 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Smn1P97801 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.54■□□□□ 0.08
Smn1P97801 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Gm8493-201ENSMUST00000196881 489 ntBASIC15.54■□□□□ 0.08
Smn1P97801 Gm43173-201ENSMUST00000202246 593 ntBASIC15.54■□□□□ 0.08
Smn1P97801 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.54■□□□□ 0.08
Smn1P97801 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.54■□□□□ 0.08
Smn1P97801 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smn1P97801 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.54■□□□□ 0.08
Smn1P97801 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Smn1P97801 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.53■□□□□ 0.08
Smn1P97801 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Gm21956-201ENSMUST00000179946 522 ntBASIC15.53■□□□□ 0.08
Smn1P97801 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.53■□□□□ 0.08
Smn1P97801 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Smn1P97801 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smn1P97801 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smn1P97801 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smn1P97801 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.52■□□□□ 0.08
Smn1P97801 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.52■□□□□ 0.08
Smn1P97801 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.52■□□□□ 0.08
Smn1P97801 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.52■□□□□ 0.08
Smn1P97801 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.52■□□□□ 0.08
Smn1P97801 Gm40848-201ENSMUST00000221998 324 ntBASIC15.52■□□□□ 0.08
Smn1P97801 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smn1P97801 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Smn1P97801 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Smn1P97801 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smn1P97801 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Smn1P97801 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smn1P97801 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms