Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Gfra1P97785 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.98□□□□□ -0.01
Gfra1P97785 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.98□□□□□ -0.01
Gfra1P97785 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gfra1P97785 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Gfra1P97785 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.97□□□□□ -0.01
Gfra1P97785 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Gfra1P97785 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.97□□□□□ -0.01
Gfra1P97785 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.97□□□□□ -0.01
Gfra1P97785 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gfra1P97785 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gfra1P97785 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gfra1P97785 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Gfra1P97785 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
Gfra1P97785 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Gfra1P97785 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.96□□□□□ -0.01
Gfra1P97785 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.96□□□□□ -0.01
Gfra1P97785 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.96□□□□□ -0.01
Gfra1P97785 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gfra1P97785 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Gfra1P97785 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gfra1P97785 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Gfra1P97785 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gfra1P97785 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Gfra1P97785 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Gfra1P97785 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Gfra1P97785 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Gfra1P97785 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.95□□□□□ -0.02
Gfra1P97785 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Gfra1P97785 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.95□□□□□ -0.02
Gfra1P97785 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.95□□□□□ -0.02
Gfra1P97785 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.95□□□□□ -0.02
Gfra1P97785 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.95□□□□□ -0.02
Gfra1P97785 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.95□□□□□ -0.02
Gfra1P97785 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.95□□□□□ -0.02
Gfra1P97785 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Gfra1P97785 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gfra1P97785 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Gfra1P97785 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.94□□□□□ -0.02
Gfra1P97785 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.94□□□□□ -0.02
Gfra1P97785 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.94□□□□□ -0.02
Gfra1P97785 Gm11249-201ENSMUST00000117071 859 ntBASIC14.94□□□□□ -0.02
Gfra1P97785 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Gfra1P97785 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Gfra1P97785 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gfra1P97785 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Gfra1P97785 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 Gm5643-201ENSMUST00000117081 966 ntBASIC14.93□□□□□ -0.02
Gfra1P97785 Gm13158-201ENSMUST00000122007 736 ntBASIC14.93□□□□□ -0.02
Gfra1P97785 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Gfra1P97785 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
Gfra1P97785 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Gfra1P97785 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms