Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.09■□□□□ 0.33
Nkx3-2P97503 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.09■□□□□ 0.33
Nkx3-2P97503 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx3-2P97503 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx3-2P97503 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.08■□□□□ 0.33
Nkx3-2P97503 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Nkx3-2P97503 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx3-2P97503 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx3-2P97503 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx3-2P97503 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx3-2P97503 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.08■□□□□ 0.32
Nkx3-2P97503 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx3-2P97503 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Gm18666-201ENSMUST00000190039 958 ntBASIC17.07■□□□□ 0.32
Nkx3-2P97503 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Gm10812-201ENSMUST00000099864 546 ntBASIC17.07■□□□□ 0.32
Nkx3-2P97503 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx3-2P97503 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Gm11249-201ENSMUST00000117071 859 ntBASIC17.06■□□□□ 0.32
Nkx3-2P97503 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.06■□□□□ 0.32
Nkx3-2P97503 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nkx3-2P97503 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx3-2P97503 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Gm22325-201ENSMUST00000158904 308 ntBASIC17.05■□□□□ 0.32
Nkx3-2P97503 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Nkx3-2P97503 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms