Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CiitaP79621 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CiitaP79621 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 Mir6349-201ENSMUST00000184059 97 ntBASIC19.66■□□□□ 0.74
CiitaP79621 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CiitaP79621 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CiitaP79621 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.65■□□□□ 0.74
CiitaP79621 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CiitaP79621 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CiitaP79621 Mir1199-201ENSMUST00000117015 119 ntBASIC19.65■□□□□ 0.74
CiitaP79621 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.65■□□□□ 0.74
CiitaP79621 Gm18025-201ENSMUST00000221733 862 ntBASIC19.65■□□□□ 0.74
CiitaP79621 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CiitaP79621 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.65■□□□□ 0.74
CiitaP79621 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.65■□□□□ 0.74
CiitaP79621 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CiitaP79621 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CiitaP79621 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.65■□□□□ 0.74
CiitaP79621 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CiitaP79621 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CiitaP79621 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CiitaP79621 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.64■□□□□ 0.74
CiitaP79621 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CiitaP79621 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 Golph3-205ENSMUST00000228671 2842 ntBASIC19.64■□□□□ 0.73
CiitaP79621 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CiitaP79621 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.64■□□□□ 0.73
CiitaP79621 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CiitaP79621 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
CiitaP79621 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CiitaP79621 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CiitaP79621 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CiitaP79621 Mir2861-201ENSMUST00000175539 82 ntBASIC19.63■□□□□ 0.73
CiitaP79621 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CiitaP79621 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Gm6576-201ENSMUST00000169678 883 ntBASIC19.62■□□□□ 0.73
CiitaP79621 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CiitaP79621 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.62■□□□□ 0.73
CiitaP79621 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CiitaP79621 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CiitaP79621 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.62■□□□□ 0.73
CiitaP79621 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CiitaP79621 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CiitaP79621 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CiitaP79621 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CiitaP79621 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CiitaP79621 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CiitaP79621 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CiitaP79621 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.61■□□□□ 0.73
CiitaP79621 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CiitaP79621 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CiitaP79621 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.61■□□□□ 0.73
CiitaP79621 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CiitaP79621 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.61■□□□□ 0.73
CiitaP79621 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.6■□□□□ 0.73
CiitaP79621 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CiitaP79621 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.6■□□□□ 0.73
CiitaP79621 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.6■□□□□ 0.73
CiitaP79621 Gm43183-201ENSMUST00000200632 547 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms