Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.96■□□□□ 0.47
Shox2P70390 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shox2P70390 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shox2P70390 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shox2P70390 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shox2P70390 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Shox2P70390 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Shox2P70390 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Shox2P70390 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.95■□□□□ 0.46
Shox2P70390 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.95■□□□□ 0.46
Shox2P70390 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.95■□□□□ 0.46
Shox2P70390 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.95■□□□□ 0.46
Shox2P70390 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.95■□□□□ 0.46
Shox2P70390 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shox2P70390 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Shox2P70390 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Shox2P70390 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.94■□□□□ 0.46
Shox2P70390 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Shox2P70390 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
Shox2P70390 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.94■□□□□ 0.46
Shox2P70390 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.94■□□□□ 0.46
Shox2P70390 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.94■□□□□ 0.46
Shox2P70390 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Shox2P70390 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shox2P70390 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Shox2P70390 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Shox2P70390 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
Shox2P70390 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shox2P70390 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shox2P70390 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shox2P70390 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shox2P70390 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shox2P70390 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.93■□□□□ 0.46
Shox2P70390 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shox2P70390 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shox2P70390 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shox2P70390 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shox2P70390 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shox2P70390 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shox2P70390 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shox2P70390 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shox2P70390 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shox2P70390 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.91■□□□□ 0.46
Shox2P70390 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Shox2P70390 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.91■□□□□ 0.46
Shox2P70390 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Shox2P70390 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.91■□□□□ 0.46
Shox2P70390 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shox2P70390 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.9■□□□□ 0.46
Shox2P70390 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Shox2P70390 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Shox2P70390 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.9■□□□□ 0.46
Shox2P70390 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Shox2P70390 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shox2P70390 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shox2P70390 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shox2P70390 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.89■□□□□ 0.45
Shox2P70390 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shox2P70390 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shox2P70390 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shox2P70390 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.89■□□□□ 0.45
Shox2P70390 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shox2P70390 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms