Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Casp4P70343 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Casp4P70343 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Casp4P70343 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Casp4P70343 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Casp4P70343 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Casp4P70343 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.95■□□□□ 0.62
Casp4P70343 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.95■□□□□ 0.62
Casp4P70343 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.95■□□□□ 0.62
Casp4P70343 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Casp4P70343 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Casp4P70343 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Casp4P70343 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Casp4P70343 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Casp4P70343 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Casp4P70343 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Casp4P70343 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.94■□□□□ 0.62
Casp4P70343 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Casp4P70343 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Casp4P70343 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Casp4P70343 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Casp4P70343 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Casp4P70343 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Casp4P70343 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Casp4P70343 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.93■□□□□ 0.62
Casp4P70343 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Casp4P70343 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Casp4P70343 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Casp4P70343 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.93■□□□□ 0.62
Casp4P70343 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.93■□□□□ 0.62
Casp4P70343 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Casp4P70343 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.93■□□□□ 0.62
Casp4P70343 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Casp4P70343 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.93■□□□□ 0.62
Casp4P70343 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Casp4P70343 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Casp4P70343 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Casp4P70343 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Casp4P70343 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.92■□□□□ 0.62
Casp4P70343 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Casp4P70343 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Casp4P70343 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.91■□□□□ 0.62
Casp4P70343 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.91■□□□□ 0.62
Casp4P70343 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Casp4P70343 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Casp4P70343 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.9■□□□□ 0.62
Casp4P70343 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Casp4P70343 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.9■□□□□ 0.62
Casp4P70343 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.9■□□□□ 0.62
Casp4P70343 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.9■□□□□ 0.62
Casp4P70343 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Casp4P70343 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.89■□□□□ 0.62
Casp4P70343 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Casp4P70343 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms