Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Msh6P54276 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Msh6P54276 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.13■■□□□ 1.29
Msh6P54276 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Msh6P54276 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Msh6P54276 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Msh6P54276 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.13■■□□□ 1.29
Msh6P54276 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Msh6P54276 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Msh6P54276 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Msh6P54276 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Msh6P54276 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Msh6P54276 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Msh6P54276 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Msh6P54276 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.12■■□□□ 1.29
Msh6P54276 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Msh6P54276 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Msh6P54276 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Msh6P54276 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC23.12■■□□□ 1.29
Msh6P54276 Gm21362-201ENSMUST00000194272 928 ntBASIC23.12■■□□□ 1.29
Msh6P54276 Gm10459-201ENSMUST00000202708 1155 ntBASIC23.12■■□□□ 1.29
Msh6P54276 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.12■■□□□ 1.29
Msh6P54276 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Msh6P54276 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Msh6P54276 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Msh6P54276 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Msh6P54276 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Msh6P54276 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Msh6P54276 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Msh6P54276 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Msh6P54276 Timm23-208ENSMUST00000226683 750 ntBASIC23.11■■□□□ 1.29
Msh6P54276 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC23.11■■□□□ 1.29
Msh6P54276 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Msh6P54276 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Msh6P54276 Gm9194-201ENSMUST00000220749 1447 ntBASIC23.11■■□□□ 1.29
Msh6P54276 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Msh6P54276 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC23.1■■□□□ 1.29
Msh6P54276 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Msh6P54276 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Msh6P54276 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Msh6P54276 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23.1■■□□□ 1.29
Msh6P54276 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Msh6P54276 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
Msh6P54276 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Msh6P54276 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Msh6P54276 Gm7712-202ENSMUST00000222331 1510 ntBASIC23.1■■□□□ 1.29
Msh6P54276 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Msh6P54276 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Msh6P54276 Gm42922-201ENSMUST00000195887 2078 ntBASIC23.09■■□□□ 1.29
Msh6P54276 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC23.09■■□□□ 1.29
Msh6P54276 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC23.09■■□□□ 1.29
Msh6P54276 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Msh6P54276 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC23.09■■□□□ 1.29
Msh6P54276 Otx2os1-204ENSMUST00000227221 751 ntBASIC23.09■■□□□ 1.29
Msh6P54276 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Msh6P54276 Golph3-205ENSMUST00000228671 2842 ntBASIC23.09■■□□□ 1.29
Msh6P54276 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Msh6P54276 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Msh6P54276 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Msh6P54276 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Msh6P54276 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Msh6P54276 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Msh6P54276 Gm38345-201ENSMUST00000192635 1748 ntBASIC23.08■■□□□ 1.29
Msh6P54276 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Msh6P54276 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Msh6P54276 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Msh6P54276 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Msh6P54276 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Msh6P54276 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Msh6P54276 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.08■■□□□ 1.29
Msh6P54276 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Msh6P54276 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC23.07■■□□□ 1.28
Msh6P54276 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Msh6P54276 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Msh6P54276 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC23.07■■□□□ 1.28
Msh6P54276 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Msh6P54276 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Msh6P54276 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Msh6P54276 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Msh6P54276 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC23.07■■□□□ 1.28
Msh6P54276 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Msh6P54276 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Msh6P54276 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Msh6P54276 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Msh6P54276 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Msh6P54276 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Msh6P54276 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Msh6P54276 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Msh6P54276 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Msh6P54276 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC23.06■■□□□ 1.28
Msh6P54276 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Msh6P54276 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msh6P54276 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms