Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nek1P51954 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek1P51954 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek1P51954 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.18■□□□□ 0.82
Nek1P51954 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek1P51954 Gm12441-201ENSMUST00000121806 588 ntBASIC20.17■□□□□ 0.82
Nek1P51954 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.17■□□□□ 0.82
Nek1P51954 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.17■□□□□ 0.82
Nek1P51954 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.17■□□□□ 0.82
Nek1P51954 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek1P51954 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek1P51954 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nek1P51954 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek1P51954 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek1P51954 Tgds-204ENSMUST00000228543 1594 ntBASIC20.17■□□□□ 0.82
Nek1P51954 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nek1P51954 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Nek1P51954 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nek1P51954 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.16■□□□□ 0.82
Nek1P51954 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek1P51954 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Nek1P51954 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Nek1P51954 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.15■□□□□ 0.82
Nek1P51954 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek1P51954 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nek1P51954 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek1P51954 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nek1P51954 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.14■□□□□ 0.81
Nek1P51954 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek1P51954 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nek1P51954 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek1P51954 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nek1P51954 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Nek1P51954 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek1P51954 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek1P51954 Gm10653-202ENSMUST00000139570 835 ntBASIC20.14■□□□□ 0.81
Nek1P51954 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Nek1P51954 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nek1P51954 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Nek1P51954 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek1P51954 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.13■□□□□ 0.81
Nek1P51954 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.13■□□□□ 0.81
Nek1P51954 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.13■□□□□ 0.81
Nek1P51954 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Nek1P51954 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nek1P51954 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.13■□□□□ 0.81
Nek1P51954 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nek1P51954 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nek1P51954 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Nek1P51954 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.12■□□□□ 0.81
Nek1P51954 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.12■□□□□ 0.81
Nek1P51954 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.12■□□□□ 0.81
Nek1P51954 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek1P51954 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nek1P51954 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.11■□□□□ 0.81
Nek1P51954 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Nek1P51954 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek1P51954 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nek1P51954 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.11■□□□□ 0.81
Nek1P51954 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.11■□□□□ 0.81
Nek1P51954 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek1P51954 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.11■□□□□ 0.81
Nek1P51954 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms