Protein–RNA interactions for Protein: P51678

Ccr3, Probable C-C chemokine receptor type 3, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr3P51678 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Ccr3P51678 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccr3P51678 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccr3P51678 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr3P51678 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccr3P51678 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr3P51678 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr3P51678 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr3P51678 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr3P51678 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccr3P51678 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccr3P51678 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr3P51678 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr3P51678 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr3P51678 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr3P51678 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.57■□□□□ 0.4
Ccr3P51678 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccr3P51678 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccr3P51678 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.56■□□□□ 0.4
Ccr3P51678 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Ccr3P51678 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccr3P51678 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.56■□□□□ 0.4
Ccr3P51678 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccr3P51678 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr3P51678 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.55■□□□□ 0.4
Ccr3P51678 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr3P51678 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.55■□□□□ 0.4
Ccr3P51678 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccr3P51678 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr3P51678 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccr3P51678 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccr3P51678 Gm11249-201ENSMUST00000117071 859 ntBASIC17.55■□□□□ 0.4
Ccr3P51678 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ccr3P51678 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccr3P51678 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.55■□□□□ 0.4
Ccr3P51678 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr3P51678 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccr3P51678 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr3P51678 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ccr3P51678 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr3P51678 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr3P51678 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccr3P51678 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr3P51678 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr3P51678 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr3P51678 Gm11927-201ENSMUST00000118472 759 ntBASIC17.54■□□□□ 0.4
Ccr3P51678 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr3P51678 Zfp783-201ENSMUST00000095946 670 ntBASIC17.54■□□□□ 0.4
Ccr3P51678 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccr3P51678 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr3P51678 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr3P51678 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccr3P51678 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr3P51678 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccr3P51678 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr3P51678 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccr3P51678 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr3P51678 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr3P51678 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr3P51678 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr3P51678 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccr3P51678 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ccr3P51678 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccr3P51678 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccr3P51678 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccr3P51678 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr3P51678 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Ccr3P51678 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr3P51678 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccr3P51678 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccr3P51678 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr3P51678 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr3P51678 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr3P51678 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr3P51678 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr3P51678 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr3P51678 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccr3P51678 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.52■□□□□ 0.4
Ccr3P51678 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccr3P51678 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.52■□□□□ 0.39
Ccr3P51678 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr3P51678 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr3P51678 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccr3P51678 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr3P51678 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Ccr3P51678 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr3P51678 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccr3P51678 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms