Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.59■□□□□ 0.89
Atoh1P48985 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.59■□□□□ 0.89
Atoh1P48985 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.59■□□□□ 0.89
Atoh1P48985 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atoh1P48985 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.59■□□□□ 0.89
Atoh1P48985 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Atoh1P48985 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atoh1P48985 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atoh1P48985 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atoh1P48985 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.58■□□□□ 0.89
Atoh1P48985 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.58■□□□□ 0.89
Atoh1P48985 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atoh1P48985 Gm7284-201ENSMUST00000131667 944 ntBASIC20.58■□□□□ 0.89
Atoh1P48985 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atoh1P48985 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.58■□□□□ 0.89
Atoh1P48985 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atoh1P48985 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.58■□□□□ 0.89
Atoh1P48985 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.58■□□□□ 0.89
Atoh1P48985 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atoh1P48985 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atoh1P48985 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Atoh1P48985 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atoh1P48985 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atoh1P48985 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.57■□□□□ 0.88
Atoh1P48985 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atoh1P48985 Golph3-202ENSMUST00000226517 2359 ntBASIC20.57■□□□□ 0.88
Atoh1P48985 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Atoh1P48985 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atoh1P48985 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Atoh1P48985 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.57■□□□□ 0.88
Atoh1P48985 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Atoh1P48985 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atoh1P48985 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Atoh1P48985 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atoh1P48985 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.56■□□□□ 0.88
Atoh1P48985 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.56■□□□□ 0.88
Atoh1P48985 Gm17661-201ENSMUST00000170317 270 ntBASIC20.56■□□□□ 0.88
Atoh1P48985 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.56■□□□□ 0.88
Atoh1P48985 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atoh1P48985 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atoh1P48985 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Atoh1P48985 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.55■□□□□ 0.88
Atoh1P48985 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Atoh1P48985 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atoh1P48985 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Atoh1P48985 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atoh1P48985 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Atoh1P48985 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atoh1P48985 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.54■□□□□ 0.88
Atoh1P48985 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atoh1P48985 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atoh1P48985 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atoh1P48985 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atoh1P48985 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atoh1P48985 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Atoh1P48985 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.53■□□□□ 0.88
Atoh1P48985 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.53■□□□□ 0.88
Atoh1P48985 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.53■□□□□ 0.88
Atoh1P48985 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Atoh1P48985 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atoh1P48985 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms