Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Gm10819-201ENSMUST00000099988 561 ntBASIC18.71■□□□□ 0.59
LmnaP48678 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LmnaP48678 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LmnaP48678 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.71■□□□□ 0.59
LmnaP48678 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LmnaP48678 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.71■□□□□ 0.58
LmnaP48678 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
LmnaP48678 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LmnaP48678 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
LmnaP48678 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.7■□□□□ 0.58
LmnaP48678 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LmnaP48678 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LmnaP48678 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LmnaP48678 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LmnaP48678 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LmnaP48678 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LmnaP48678 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LmnaP48678 Mir1199-201ENSMUST00000117015 119 ntBASIC18.69■□□□□ 0.58
LmnaP48678 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LmnaP48678 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.69■□□□□ 0.58
LmnaP48678 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LmnaP48678 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Dio3-201ENSMUST00000097228 1449 ntBASIC18.68■□□□□ 0.58
LmnaP48678 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.68■□□□□ 0.58
LmnaP48678 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.68■□□□□ 0.58
LmnaP48678 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.68■□□□□ 0.58
LmnaP48678 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LmnaP48678 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LmnaP48678 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LmnaP48678 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LmnaP48678 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LmnaP48678 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LmnaP48678 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Gm15378-201ENSMUST00000121894 207 ntBASIC18.67■□□□□ 0.58
LmnaP48678 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LmnaP48678 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LmnaP48678 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LmnaP48678 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LmnaP48678 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.66■□□□□ 0.58
LmnaP48678 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.66■□□□□ 0.58
LmnaP48678 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LmnaP48678 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.66■□□□□ 0.58
LmnaP48678 Gm10698-201ENSMUST00000182663 604 ntBASIC18.66■□□□□ 0.58
LmnaP48678 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.66■□□□□ 0.58
LmnaP48678 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.66■□□□□ 0.58
LmnaP48678 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms