Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx2P48379 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.98■□□□□ 0.63
Rfx2P48379 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Rfx2P48379 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.98■□□□□ 0.63
Rfx2P48379 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.98■□□□□ 0.63
Rfx2P48379 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx2P48379 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx2P48379 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rfx2P48379 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx2P48379 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx2P48379 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx2P48379 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rfx2P48379 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx2P48379 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx2P48379 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rfx2P48379 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Gm5643-201ENSMUST00000117081 966 ntBASIC18.97■□□□□ 0.63
Rfx2P48379 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx2P48379 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rfx2P48379 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfx2P48379 Gm10252-201ENSMUST00000209541 832 ntBASIC18.97■□□□□ 0.63
Rfx2P48379 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rfx2P48379 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rfx2P48379 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.97■□□□□ 0.63
Rfx2P48379 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.96■□□□□ 0.63
Rfx2P48379 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Rfx2P48379 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.96■□□□□ 0.63
Rfx2P48379 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.96■□□□□ 0.63
Rfx2P48379 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rfx2P48379 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx2P48379 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Rfx2P48379 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.95■□□□□ 0.62
Rfx2P48379 Gm18666-201ENSMUST00000190039 958 ntBASIC18.95■□□□□ 0.62
Rfx2P48379 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.95■□□□□ 0.62
Rfx2P48379 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.95■□□□□ 0.62
Rfx2P48379 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.95■□□□□ 0.62
Rfx2P48379 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Rfx2P48379 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx2P48379 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.94■□□□□ 0.62
Rfx2P48379 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx2P48379 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx2P48379 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx2P48379 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx2P48379 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.94■□□□□ 0.62
Rfx2P48379 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx2P48379 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.93■□□□□ 0.62
Rfx2P48379 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx2P48379 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx2P48379 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rfx2P48379 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Rfx2P48379 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx2P48379 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Rfx2P48379 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rfx2P48379 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rfx2P48379 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx2P48379 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx2P48379 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Rfx2P48379 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx2P48379 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx2P48379 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx2P48379 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfx2P48379 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms