Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx1P48377 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx1P48377 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.67■■□□□ 1.06
Rfx1P48377 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx1P48377 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx1P48377 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.67■■□□□ 1.06
Rfx1P48377 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx1P48377 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.67■■□□□ 1.06
Rfx1P48377 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Rfx1P48377 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx1P48377 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rfx1P48377 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx1P48377 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx1P48377 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.67■■□□□ 1.06
Rfx1P48377 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx1P48377 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx1P48377 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.66■■□□□ 1.06
Rfx1P48377 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx1P48377 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx1P48377 Gm13241-201ENSMUST00000094493 780 ntBASIC21.66■■□□□ 1.06
Rfx1P48377 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx1P48377 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Rfx1P48377 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.66■■□□□ 1.06
Rfx1P48377 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.66■■□□□ 1.06
Rfx1P48377 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.65■■□□□ 1.06
Rfx1P48377 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Rfx1P48377 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rfx1P48377 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Rfx1P48377 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.65■■□□□ 1.06
Rfx1P48377 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx1P48377 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.64■■□□□ 1.06
Rfx1P48377 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rfx1P48377 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Rfx1P48377 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.64■■□□□ 1.06
Rfx1P48377 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rfx1P48377 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.64■■□□□ 1.05
Rfx1P48377 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx1P48377 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.64■■□□□ 1.05
Rfx1P48377 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx1P48377 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx1P48377 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Rfx1P48377 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Rfx1P48377 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx1P48377 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx1P48377 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx1P48377 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rfx1P48377 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Rfx1P48377 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.63■■□□□ 1.05
Rfx1P48377 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Rfx1P48377 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.63■■□□□ 1.05
Rfx1P48377 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx1P48377 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rfx1P48377 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Rfx1P48377 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx1P48377 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Rfx1P48377 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx1P48377 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfx1P48377 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms