Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Gm38285-201ENSMUST00000192928 922 ntBASIC17.12■□□□□ 0.33
Nkx2-6P43688 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.12■□□□□ 0.33
Nkx2-6P43688 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-6P43688 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-6P43688 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-6P43688 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-6P43688 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-6P43688 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-6P43688 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.1■□□□□ 0.33
Nkx2-6P43688 Mir5122-201ENSMUST00000175004 89 ntBASIC17.1■□□□□ 0.33
Nkx2-6P43688 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-6P43688 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Nkx2-6P43688 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-6P43688 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-6P43688 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-6P43688 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.09■□□□□ 0.33
Nkx2-6P43688 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-6P43688 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Nkx2-6P43688 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Nkx2-6P43688 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Nkx2-6P43688 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx2-6P43688 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx2-6P43688 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx2-6P43688 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Gm11643-201ENSMUST00000119578 864 ntBASIC17.07■□□□□ 0.32
Nkx2-6P43688 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.07■□□□□ 0.32
Nkx2-6P43688 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.07■□□□□ 0.32
Nkx2-6P43688 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-6P43688 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-6P43688 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-6P43688 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nkx2-6P43688 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-6P43688 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx2-6P43688 Gm15375-201ENSMUST00000119510 849 ntBASIC17.06■□□□□ 0.32
Nkx2-6P43688 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms