Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc2P43407 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc2P43407 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc2P43407 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc2P43407 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sdc2P43407 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc2P43407 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc2P43407 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sdc2P43407 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.34■□□□□ 0.85
Sdc2P43407 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sdc2P43407 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc2P43407 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc2P43407 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sdc2P43407 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc2P43407 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.34■□□□□ 0.85
Sdc2P43407 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.34■□□□□ 0.85
Sdc2P43407 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.34■□□□□ 0.85
Sdc2P43407 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc2P43407 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc2P43407 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc2P43407 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdc2P43407 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sdc2P43407 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdc2P43407 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdc2P43407 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdc2P43407 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sdc2P43407 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdc2P43407 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdc2P43407 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdc2P43407 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Sdc2P43407 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdc2P43407 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Sdc2P43407 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.32■□□□□ 0.84
Sdc2P43407 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.32■□□□□ 0.84
Sdc2P43407 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sdc2P43407 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdc2P43407 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.31■□□□□ 0.84
Sdc2P43407 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.31■□□□□ 0.84
Sdc2P43407 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sdc2P43407 Gm6420-201ENSMUST00000193885 723 ntBASIC20.31■□□□□ 0.84
Sdc2P43407 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.31■□□□□ 0.84
Sdc2P43407 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sdc2P43407 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdc2P43407 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sdc2P43407 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Tgds-204ENSMUST00000228543 1594 ntBASIC20.3■□□□□ 0.84
Sdc2P43407 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.3■□□□□ 0.84
Sdc2P43407 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.3■□□□□ 0.84
Sdc2P43407 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdc2P43407 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.29■□□□□ 0.84
Sdc2P43407 Nespas-201ENSMUST00000143738 1083 ntBASIC20.29■□□□□ 0.84
Sdc2P43407 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.29■□□□□ 0.84
Sdc2P43407 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdc2P43407 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc2P43407 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sdc2P43407 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Sdc2P43407 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc2P43407 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc2P43407 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc2P43407 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc2P43407 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc2P43407 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms