Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.56■□□□□ 0.72
HttP42859 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.56■□□□□ 0.72
HttP42859 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.56■□□□□ 0.72
HttP42859 Birc2-201ENSMUST00000054878 378 ntBASIC19.56■□□□□ 0.72
HttP42859 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HttP42859 Gm11950-201ENSMUST00000121615 838 ntBASIC19.55■□□□□ 0.72
HttP42859 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.55■□□□□ 0.72
HttP42859 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HttP42859 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HttP42859 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HttP42859 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HttP42859 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HttP42859 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HttP42859 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
HttP42859 Gm27459-201ENSMUST00000184860 107 ntBASIC19.55■□□□□ 0.72
HttP42859 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HttP42859 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HttP42859 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.54■□□□□ 0.72
HttP42859 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.54■□□□□ 0.72
HttP42859 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HttP42859 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HttP42859 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HttP42859 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HttP42859 Mir8098-201ENSMUST00000184011 137 ntBASIC19.54■□□□□ 0.72
HttP42859 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HttP42859 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HttP42859 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.53■□□□□ 0.72
HttP42859 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HttP42859 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
HttP42859 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.53■□□□□ 0.72
HttP42859 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HttP42859 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HttP42859 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HttP42859 Mir2861-201ENSMUST00000175539 82 ntBASIC19.52■□□□□ 0.72
HttP42859 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HttP42859 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
HttP42859 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HttP42859 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HttP42859 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.52■□□□□ 0.72
HttP42859 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HttP42859 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HttP42859 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HttP42859 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.52■□□□□ 0.72
HttP42859 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HttP42859 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HttP42859 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HttP42859 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.51■□□□□ 0.71
HttP42859 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HttP42859 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.51■□□□□ 0.71
HttP42859 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HttP42859 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HttP42859 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HttP42859 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HttP42859 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
HttP42859 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HttP42859 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HttP42859 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HttP42859 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.49■□□□□ 0.71
HttP42859 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
HttP42859 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HttP42859 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HttP42859 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HttP42859 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HttP42859 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HttP42859 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HttP42859 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HttP42859 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HttP42859 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms