Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sox6P40645 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox6P40645 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sox6P40645 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sox6P40645 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Sox6P40645 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sox6P40645 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sox6P40645 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Sox6P40645 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.02■□□□□ 0.32
Sox6P40645 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox6P40645 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sox6P40645 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Gm8495-201ENSMUST00000188740 694 ntBASIC17.01■□□□□ 0.31
Sox6P40645 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.01■□□□□ 0.31
Sox6P40645 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Reep4-203ENSMUST00000226563 1444 ntBASIC17.01■□□□□ 0.31
Sox6P40645 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox6P40645 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sox6P40645 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17■□□□□ 0.31
Sox6P40645 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox6P40645 Gm13234-201ENSMUST00000120010 747 ntBASIC17■□□□□ 0.31
Sox6P40645 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17■□□□□ 0.31
Sox6P40645 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
Sox6P40645 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17■□□□□ 0.31
Sox6P40645 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Sox6P40645 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox6P40645 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Sox6P40645 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.99■□□□□ 0.31
Sox6P40645 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Gm42642-201ENSMUST00000200683 355 ntBASIC16.99■□□□□ 0.31
Sox6P40645 Gm18671-201ENSMUST00000214826 683 ntBASIC16.99■□□□□ 0.31
Sox6P40645 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sox6P40645 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox6P40645 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sox6P40645 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox6P40645 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox6P40645 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Gm38205-201ENSMUST00000192243 258 ntBASIC16.98■□□□□ 0.31
Sox6P40645 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox6P40645 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.98■□□□□ 0.31
Sox6P40645 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.98■□□□□ 0.31
Sox6P40645 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox6P40645 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sox6P40645 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms