Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm37179-201ENSMUST00000194862 823 ntBASIC18.55■□□□□ 0.56
Mmp13P33435 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.55■□□□□ 0.56
Mmp13P33435 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp13P33435 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp13P33435 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.55■□□□□ 0.56
Mmp13P33435 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp13P33435 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp13P33435 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Mmp13P33435 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Mmp13P33435 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.54■□□□□ 0.56
Mmp13P33435 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.54■□□□□ 0.56
Mmp13P33435 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Mmp13P33435 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp13P33435 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.53■□□□□ 0.56
Mmp13P33435 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Mmp13P33435 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.53■□□□□ 0.56
Mmp13P33435 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.53■□□□□ 0.56
Mmp13P33435 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.53■□□□□ 0.56
Mmp13P33435 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.53■□□□□ 0.56
Mmp13P33435 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp13P33435 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Mmp13P33435 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.53■□□□□ 0.56
Mmp13P33435 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp13P33435 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp13P33435 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp13P33435 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.52■□□□□ 0.56
Mmp13P33435 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp13P33435 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.52■□□□□ 0.56
Mmp13P33435 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp13P33435 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp13P33435 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Mmp13P33435 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp13P33435 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Mmp13P33435 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp13P33435 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.52■□□□□ 0.55
Mmp13P33435 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp13P33435 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp13P33435 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp13P33435 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Mmp13P33435 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.51■□□□□ 0.55
Mmp13P33435 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Mmp13P33435 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.51■□□□□ 0.55
Mmp13P33435 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Gm13146-201ENSMUST00000118508 780 ntBASIC18.51■□□□□ 0.55
Mmp13P33435 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp13P33435 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.5■□□□□ 0.55
Mmp13P33435 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.5■□□□□ 0.55
Mmp13P33435 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.5■□□□□ 0.55
Mmp13P33435 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.5■□□□□ 0.55
Mmp13P33435 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Mmp13P33435 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.5■□□□□ 0.55
Mmp13P33435 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp13P33435 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms