Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfbP31240 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PdgfbP31240 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfbP31240 Gm28033-201ENSMUST00000184224 96 ntBASIC18.23■□□□□ 0.51
PdgfbP31240 Gm27704-201ENSMUST00000185094 107 ntBASIC18.23■□□□□ 0.51
PdgfbP31240 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PdgfbP31240 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfbP31240 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfbP31240 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfbP31240 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfbP31240 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfbP31240 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfbP31240 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.22■□□□□ 0.51
PdgfbP31240 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.22■□□□□ 0.51
PdgfbP31240 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfbP31240 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfbP31240 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfbP31240 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfbP31240 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfbP31240 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfbP31240 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfbP31240 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PdgfbP31240 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PdgfbP31240 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfbP31240 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfbP31240 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PdgfbP31240 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfbP31240 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfbP31240 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfbP31240 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PdgfbP31240 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfbP31240 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.2■□□□□ 0.5
PdgfbP31240 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfbP31240 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfbP31240 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfbP31240 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfbP31240 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PdgfbP31240 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.2■□□□□ 0.5
PdgfbP31240 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfbP31240 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfbP31240 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
PdgfbP31240 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfbP31240 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.19■□□□□ 0.5
PdgfbP31240 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.19■□□□□ 0.5
PdgfbP31240 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.19■□□□□ 0.5
PdgfbP31240 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PdgfbP31240 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PdgfbP31240 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfbP31240 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PdgfbP31240 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PdgfbP31240 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PdgfbP31240 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PdgfbP31240 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PdgfbP31240 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PdgfbP31240 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PdgfbP31240 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PdgfbP31240 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PdgfbP31240 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PdgfbP31240 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
PdgfbP31240 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.17■□□□□ 0.5
PdgfbP31240 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.17■□□□□ 0.5
PdgfbP31240 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.17■□□□□ 0.5
PdgfbP31240 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PdgfbP31240 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PdgfbP31240 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PdgfbP31240 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PdgfbP31240 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PdgfbP31240 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PdgfbP31240 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PdgfbP31240 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms