Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6aP27664 Gm10653-202ENSMUST00000139570 835 ntBASIC21.06■□□□□ 0.96
Pde6aP27664 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.06■□□□□ 0.96
Pde6aP27664 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6aP27664 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6aP27664 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6aP27664 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pde6aP27664 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6aP27664 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6aP27664 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6aP27664 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Pde6aP27664 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6aP27664 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6aP27664 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pde6aP27664 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.04■□□□□ 0.96
Pde6aP27664 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.04■□□□□ 0.96
Pde6aP27664 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.04■□□□□ 0.96
Pde6aP27664 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Pde6aP27664 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pde6aP27664 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.04■□□□□ 0.96
Pde6aP27664 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6aP27664 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.04■□□□□ 0.96
Pde6aP27664 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Pde6aP27664 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pde6aP27664 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.03■□□□□ 0.96
Pde6aP27664 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.03■□□□□ 0.96
Pde6aP27664 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pde6aP27664 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Pde6aP27664 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Mtag2-201ENSMUST00000058665 714 ntBASIC21.03■□□□□ 0.96
Pde6aP27664 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pde6aP27664 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6aP27664 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6aP27664 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pde6aP27664 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6aP27664 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6aP27664 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6aP27664 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Pde6aP27664 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6aP27664 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6aP27664 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6aP27664 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pde6aP27664 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Pde6aP27664 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Pde6aP27664 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.02■□□□□ 0.95
Pde6aP27664 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pde6aP27664 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pde6aP27664 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.01■□□□□ 0.95
Pde6aP27664 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pde6aP27664 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pde6aP27664 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pde6aP27664 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Gm27011-201ENSMUST00000182352 972 ntBASIC21■□□□□ 0.95
Pde6aP27664 Trmt13-210ENSMUST00000198454 880 ntBASIC21■□□□□ 0.95
Pde6aP27664 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Pde6aP27664 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pde6aP27664 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Pde6aP27664 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.99■□□□□ 0.95
Pde6aP27664 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms